Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOM15119.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)    
Predicted Functional Partners:
yidA_3
Sugar phosphatase; YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.956
lipL
Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.926
ywiB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.911
rpoE
DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
 
     0.731
yqeH
GTPase; In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
AOM15444.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.644
AOM14979.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.639
AOM15079.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.631
GlxR
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.631
AOM15649.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.631
Your Current Organism:
Enterococcus faecium
NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium
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