sigV protein (Enterococcus faecium) - STRING interaction network

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[Homology]

Score

sigV

RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa)

Predicted Functional Partners:

rsiV

0.875

rpoB

0.795

PgdA

0.788

rpoN

0.784

oatA

0.758

rpoC

0.732

eep_1

0.726

AOM16887.1

0.687

AOM17257.1

0.648

AOM17288.1

0.648

Your Current Organism:

Enterococcus faecium

NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOM16887.1	sigV	AL014_11680	AL014_02170	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.687
AOM17257.1	sigV	AL014_13855	AL014_02170	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.648
AOM17288.1	sigV	AL014_14015	AL014_02170	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.648
PgdA	oatA	AL014_02185	AL014_14310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
PgdA	rpoN	AL014_02185	AL014_02195	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
PgdA	rsiV	AL014_02185	AL014_02175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
PgdA	sigV	AL014_02185	AL014_02170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.788
eep_1	sigV	AL014_07500	AL014_02170	Metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.726
oatA	PgdA	AL014_14310	AL014_02185	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
oatA	sigV	AL014_14310	AL014_02170	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.758
rpoB	rpoC	AL014_12570	AL014_12575	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoN	AL014_12570	AL014_02195	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
rpoB	sigV	AL014_12570	AL014_02170	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.795
rpoC	rpoB	AL014_12575	AL014_12570	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoN	AL014_12575	AL014_02195	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
rpoC	sigV	AL014_12575	AL014_02170	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.732
rpoN	PgdA	AL014_02195	AL014_02185	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
rpoN	rpoB	AL014_02195	AL014_12570	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
rpoN	rpoC	AL014_02195	AL014_12575	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875
rpoN	sigV	AL014_02195	AL014_02170	RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.784

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