Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOM14846.1 | rpoN | AL014_00620 | AL014_02195 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AOM14858.1 | rpoN | AL014_00690 | AL014_02195 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.903 |
| AOM16371.1 | rpoN | AL014_08855 | AL014_02195 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| algB | rpoN | AL014_08515 | AL014_02195 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
| luxO_1 | rpoN | AL014_08305 | AL014_02195 | ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
| luxO_2 | rpoN | AL014_15195 | AL014_02195 | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.914 |
| rpoA | rpoB | AL014_11770 | AL014_12570 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoC | AL014_11770 | AL014_12575 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoA | rpoN | AL014_11770 | AL014_02195 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| rpoA | rpoZ | AL014_11770 | AL014_13425 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
| rpoB | rpoA | AL014_12570 | AL014_11770 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoC | AL014_12570 | AL014_12575 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoB | rpoN | AL014_12570 | AL014_02195 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.926 |
| rpoB | rpoZ | AL014_12570 | AL014_13425 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.997 |
| rpoC | rpoA | AL014_12575 | AL014_11770 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoC | rpoB | AL014_12575 | AL014_12570 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rpoC | rpoN | AL014_12575 | AL014_02195 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.925 |
| rpoC | rpoZ | AL014_12575 | AL014_13425 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.996 |
| rpoN | AOM14846.1 | AL014_02195 | AL014_00620 | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| rpoN | AOM14858.1 | AL014_02195 | AL014_00690 | RNA polymerase factor sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.903 |
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