hupA protein (Enterococcus faecium) - STRING interaction network

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Score

hupA

DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa)

Predicted Functional Partners:

engA

0.915

CsbD

0.763

rplL

0.699

rpsT

0.681

degA_2

0.645

cspE_1

0.606

rpsP

0.601

CspC

0.587

rpmC

0.585

rplU

0.575

Your Current Organism:

Enterococcus faecium

NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CsbD	hupA	AL014_15260	AL014_04730	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.763
CsbD	rpmC	AL014_15260	AL014_11860	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.	50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.	0.735
CsbD	rpsP	AL014_15260	AL014_03220	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.	30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.	0.797
CspC	hupA	AL014_05895	AL014_04730	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.587
CspC	rplU	AL014_05895	AL014_08530	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.436
CspC	rpmC	AL014_05895	AL014_11860	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.	0.407
CspC	rpsP	AL014_05895	AL014_03220	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.	0.411
CspC	rpsT	AL014_05895	AL014_05410	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.437
cspE_1	hupA	AL014_01750	AL014_04730	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.606
cspE_1	rplU	AL014_01750	AL014_08530	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.436
cspE_1	rpmC	AL014_01750	AL014_11860	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.	0.407
cspE_1	rpsP	AL014_01750	AL014_03220	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.	0.411
cspE_1	rpsT	AL014_01750	AL014_05410	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.437
degA_2	hupA	AL014_00015	AL014_04730	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.645
engA	hupA	AL014_04725	AL014_04730	GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	0.915
engA	rpsT	AL014_04725	AL014_05410	GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.623
hupA	CsbD	AL014_04730	AL014_15260	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.	0.763
hupA	CspC	AL014_04730	AL014_05895	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
hupA	cspE_1	AL014_04730	AL014_01750	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.606
hupA	degA_2	AL014_04730	AL014_00015	DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645

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