Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AmiCN-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
SagA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.732
lytA_2
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.708
cwlC
Cell wall hydrolase; Probably involved in cell-wall metabolism. Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family.
  
  
 0.686
AOM16216.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.680
AOM16211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.631
AOM15383.1
Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.611
AOM17023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
AOM15010.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.599
xerC_19
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
      
 0.599
AOM15378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.548
Your Current Organism:
Enterococcus faecium
NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium
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