Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOM16596.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
hflB_2
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.845
AOM16597.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
gluP
Peptidase S54; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.622
AOM15919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
yuaF
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.474
AOM17221.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.474
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.467
AOM16593.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
YueF
M16 family metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.462
AOM17181.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.462
Your Current Organism:
Enterococcus faecium
NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium
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