STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmR_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)    
Predicted Functional Partners:
AOM16643.1
Sulfur reduction protein DsrE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.884
moeZ
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.865
frmB_2
Tributyrin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.623
cdr_2
CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.591
recD
Exodeoxyribonuclease V subunit alpha; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
  
 0.486
puuD
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.483
AOM16681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.474
AOM16865.1
M protein trans-acting positive regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.474
AOM17532.1
M protein trans-acting positive regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.474
licR_1
Transcriptional antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.454
Your Current Organism:
Enterococcus faecium
NCBI taxonomy Id: 1352
Other names: ATCC 19434, CCUG 542, CFBP 4248, CIP 103014, DSM 20477, E. faecium, JCM 5804, JCM 8727, LMG 11423, LMG:11423, NBRC 100485, NBRC 100486, NCDO 942, NCIMB 11508, NCTC 7171, Streptococcus faecium
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