EWM64_g10979 protein (Hericium alpestre) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EWM64_g10979

Uncharacterized protein. (89 aa)

Predicted Functional Partners:

EWM64_g6649

0.729

EWM64_g5483

0.729

EWM64_g2358

0.729

EWM64_g1893

0.729

EWM64_g1098

0.673

EWM64_g9169

0.594

EWM64_g10115

0.582

EWM64_g6420

0.576

EWM64_g10337

0.575

EWM64_g10566

0.575

Your Current Organism:

Hericium alpestre

NCBI taxonomy Id: 135208
Other names: H. alpestre

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EWM64_g10115	EWM64_g10337	A0A4Y9ZIP3	A0A4Y9ZG09	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.550
EWM64_g10115	EWM64_g10566	A0A4Y9ZIP3	A0A4Y9ZI79	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.550
EWM64_g10115	EWM64_g10979	A0A4Y9ZIP3	A0A4Y9ZGS8	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.582
EWM64_g10115	EWM64_g6420	A0A4Y9ZIP3	A0A4Y9ZS28	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.562
EWM64_g10115	EWM64_g9169	A0A4Y9ZIP3	A0A4Y9ZLY8	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.493
EWM64_g10337	EWM64_g10115	A0A4Y9ZG09	A0A4Y9ZIP3	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.550
EWM64_g10337	EWM64_g10979	A0A4Y9ZG09	A0A4Y9ZGS8	Uncharacterized protein.	Uncharacterized protein.	0.575
EWM64_g10337	EWM64_g1098	A0A4Y9ZG09	A0A4Z0A9I2	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.530
EWM64_g10337	EWM64_g1893	A0A4Y9ZG09	A0A4Z0A5W0	Uncharacterized protein.	Cullin_Nedd8 domain-containing protein.	0.485
EWM64_g10337	EWM64_g2358	A0A4Y9ZG09	A0A4Z0A5P5	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10337	EWM64_g5483	A0A4Y9ZG09	A0A4Y9ZVD4	Uncharacterized protein.	Cullin domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10337	EWM64_g6649	A0A4Y9ZG09	A0A4Y9ZSY4	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10566	EWM64_g10115	A0A4Y9ZI79	A0A4Y9ZIP3	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.550
EWM64_g10566	EWM64_g10979	A0A4Y9ZI79	A0A4Y9ZGS8	Uncharacterized protein.	Uncharacterized protein.	0.575
EWM64_g10566	EWM64_g1098	A0A4Y9ZI79	A0A4Z0A9I2	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.530
EWM64_g10566	EWM64_g1893	A0A4Y9ZI79	A0A4Z0A5W0	Uncharacterized protein.	Cullin_Nedd8 domain-containing protein.	0.485
EWM64_g10566	EWM64_g2358	A0A4Y9ZI79	A0A4Z0A5P5	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10566	EWM64_g5483	A0A4Y9ZI79	A0A4Y9ZVD4	Uncharacterized protein.	Cullin domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10566	EWM64_g6649	A0A4Y9ZI79	A0A4Y9ZSY4	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.485
EWM64_g10979	EWM64_g10115	A0A4Y9ZGS8	A0A4Y9ZIP3	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.582