STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWM64_g7822SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (766 aa)    
Predicted Functional Partners:
EWM64_g7117
Uncharacterized protein.
   
 
 0.966
EWM64_g8546
OBG-type G domain-containing protein.
   
 
 0.949
EWM64_g477
RRM domain-containing protein.
   
 
 0.928
EWM64_g5913
Nop domain-containing protein.
   
 
 0.918
EWM64_g1197
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.912
EWM64_g1021
Brix domain-containing protein.
   
 
 0.909
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.901
EWM64_g1340
NOC3p domain-containing protein.
   
 
 0.899
EWM64_g8793
Uncharacterized protein.
   
 
 0.893
EWM64_g8209
Uncharacterized protein.
   
 
 0.888
Your Current Organism:
Hericium alpestre
NCBI taxonomy Id: 135208
Other names: H. alpestre
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.