STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWM64_g6376Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
EWM64_g1676
WD_REPEATS_REGION domain-containing protein.
    
 0.761
EWM64_g1959
Uncharacterized protein.
    
 0.732
EWM64_g4140
TAF domain-containing protein.
    
  0.707
EWM64_g3259
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.707
EWM64_g1273
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.707
EWM64_g3114
TFIID_20kDa domain-containing protein.
    
 0.699
EWM64_g10098
SCA7 domain-containing protein.
    
  0.693
EWM64_g5199
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.690
EWM64_g10213
Ribosomal_S27 domain-containing protein.
    
 0.686
EWM64_g6684
Ubiquitin-like domain-containing protein.
    
 0.686
Your Current Organism:
Hericium alpestre
NCBI taxonomy Id: 135208
Other names: H. alpestre
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