STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EWM64_g5726Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (156 aa)    
Predicted Functional Partners:
EWM64_g10340
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 0.994
EWM64_g10561
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
EWM64_g7798
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.994
EWM64_g4381
Uncharacterized protein.
  
 0.994
EWM64_g3523
Ribosomal_S10 domain-containing protein.
  
 0.994
EWM64_g2434
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.994
EWM64_g3130
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.994
EWM64_g2262
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.994
EWM64_g1582
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.994
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.994
Your Current Organism:
Hericium alpestre
NCBI taxonomy Id: 135208
Other names: H. alpestre
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