EWM64_g3009 protein (Hericium alpestre) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EWM64_g3009

Uncharacterized protein. (837 aa)

Predicted Functional Partners:

EWM64_g6112

0.986

EWM64_g3010

0.899

EWM64_g6835

0.752

EWM64_g1206

0.707

EWM64_g1945

0.677

EWM64_g4661

0.649

EWM64_g1207

0.649

EWM64_g1576

0.649

EWM64_g5066

0.457

EWM64_g4035

0.406

Your Current Organism:

Hericium alpestre

NCBI taxonomy Id: 135208
Other names: H. alpestre

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EWM64_g1206	EWM64_g1945	A0A4Z0A8Z0	A0A4Z0A5R4	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.996
EWM64_g1206	EWM64_g3009	A0A4Z0A8Z0	A0A4Z0A3I5	Uncharacterized protein.	Uncharacterized protein.	0.707
EWM64_g1206	EWM64_g6112	A0A4Z0A8Z0	A0A4Y9ZUQ0	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.	0.996
EWM64_g1206	EWM64_g6835	A0A4Z0A8Z0	A0A4Y9ZSZ2	Uncharacterized protein.	Uncharacterized protein.	0.996
EWM64_g1207	EWM64_g1945	A0A4Z0A6W7	A0A4Z0A5R4	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.998
EWM64_g1207	EWM64_g3009	A0A4Z0A6W7	A0A4Z0A3I5	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Uncharacterized protein.	0.649
EWM64_g1207	EWM64_g6112	A0A4Z0A6W7	A0A4Y9ZUQ0	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.	0.999
EWM64_g1207	EWM64_g6835	A0A4Z0A6W7	A0A4Y9ZSZ2	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	Uncharacterized protein.	0.998
EWM64_g1576	EWM64_g3009	A0A4Z0A842	A0A4Z0A3I5	Uncharacterized protein.	Uncharacterized protein.	0.649
EWM64_g1576	EWM64_g5066	A0A4Z0A842	A0A4Y9ZXL2	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.831
EWM64_g1945	EWM64_g1206	A0A4Z0A5R4	A0A4Z0A8Z0	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Uncharacterized protein.	0.996
EWM64_g1945	EWM64_g1207	A0A4Z0A5R4	A0A4Z0A6W7	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.998
EWM64_g1945	EWM64_g3009	A0A4Z0A5R4	A0A4Z0A3I5	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Uncharacterized protein.	0.677
EWM64_g1945	EWM64_g6112	A0A4Z0A5R4	A0A4Y9ZUQ0	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.	0.999
EWM64_g1945	EWM64_g6835	A0A4Z0A5R4	A0A4Y9ZSZ2	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	Uncharacterized protein.	0.999
EWM64_g3009	EWM64_g1206	A0A4Z0A3I5	A0A4Z0A8Z0	Uncharacterized protein.	Uncharacterized protein.	0.707
EWM64_g3009	EWM64_g1207	A0A4Z0A3I5	A0A4Z0A6W7	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.649
EWM64_g3009	EWM64_g1576	A0A4Z0A3I5	A0A4Z0A842	Uncharacterized protein.	Uncharacterized protein.	0.649
EWM64_g3009	EWM64_g1945	A0A4Z0A3I5	A0A4Z0A5R4	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.677
EWM64_g3009	EWM64_g3010	A0A4Z0A3I5	A0A4Z0A1P4	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.899