STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST31413.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (164 aa)    
Predicted Functional Partners:
EST31412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    
0.805
EST33360.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.728
EST24240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.725
EST34706.1
Deacetylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.713
EST35034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.703
EST34541.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.662
EST35832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.650
EST36153.1
Hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.649
EST33080.1
Chitinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.560
EST21333.1
Chitinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.551
Your Current Organism:
Streptomyces roseochromogenus
NCBI taxonomy Id: 1352936
Other names: S. roseochromogenus subsp. oscitans DS 12.976, Streptomyces roseochromogenes (sic) subsp. oscitans DS 12.976, Streptomyces roseochromogenes (sic) var. oscitans DS 12.976, Streptomyces roseochromogenus subsp. oscitans DS 12.976
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.