STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EST26640.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (327 aa)    
Predicted Functional Partners:
EST21433.1
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
 0.948
EST20797.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.946
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
 0.944
EST31906.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.928
EST31020.1
Adenosine deaminase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.916
EST24261.1
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
    
 0.916
EST29596.1
Nucleotidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.
    
 0.908
EST23339.1
Ribokinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.908
EST30640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.
    
 0.904
EST29402.1
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.903
Your Current Organism:
Streptomyces roseochromogenus
NCBI taxonomy Id: 1352936
Other names: S. roseochromogenus subsp. oscitans DS 12.976, Streptomyces roseochromogenes (sic) subsp. oscitans DS 12.976, Streptomyces roseochromogenes (sic) var. oscitans DS 12.976, Streptomyces roseochromogenus subsp. oscitans DS 12.976
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