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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMG49224.11,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
AMG49220.1
Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
AMG49225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.830
AMG49222.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
AMG49223.1
Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.
  
  
 0.783
AMG49221.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
AMG50780.1
NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.748
AMG49219.1
PTS cellbiose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
AMG50432.1
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.651
gmuC_11
PTS maltose transporter subunit IIBC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.642
AMG50481.1
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.639
Your Current Organism:
Enterococcus gallinarum
NCBI taxonomy Id: 1353
Other names: ATCC 49573, CCUG 18658, CECT 970, CIP 103013, DSM 24841, E. gallinarum, JCM 8728, LMG 13129, LMG:13129, NBRC 100675, NCDO 2313, NCIMB 702313, NCTC 12359, Streptococcus gallinarum, strain F87/276, strain PB21
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