Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMG50620.1Minor capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
AL523_13095
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.826
AMG50619.1
Minor capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.826
AMG50621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.824
AMG50618.1
Minor capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
AMG50623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
AMG50625.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
AMG50624.1
Phage tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
AMG50626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.666
AMG50627.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.659
AMG50622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.642
Your Current Organism:
Enterococcus gallinarum
NCBI taxonomy Id: 1353
Other names: ATCC 49573, CCUG 18658, CECT 970, CIP 103013, DSM 24841, E. gallinarum, JCM 8728, LMG 13129, LMG:13129, NBRC 100675, NCDO 2313, NCIMB 702313, NCTC 12359, Streptococcus gallinarum, strain F87/276, strain PB21
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