STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2IA74BRF1-domain-containing protein. (698 aa)    
Predicted Functional Partners:
A0A1Y2ILK5
TBP-domain-containing protein.
   
 0.999
A0A1Y2IQ17
SANT domain-containing protein.
    
 0.999
A0A1Y2IVY5
TPR-like protein.
    
 0.992
A0A1Y2IKP4
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.978
A0A1Y2IRF8
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.976
A0A1Y2IHU2
Uncharacterized protein.
    
 0.973
A0A1Y2IYC5
Uncharacterized protein.
    
 0.973
A0A1Y2IP80
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.971
A0A1Y2IDS4
Insert subdomain of RNA polymerase alpha subunit.
    
 0.968
A0A1Y2IF62
Uncharacterized protein.
    
 0.968
Your Current Organism:
Trametes coccinea
NCBI taxonomy Id: 1353009
Other names: Pycnoporus coccineus BRFM310, T. coccinea BRFM310, Trametes coccinea BRFM310
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