STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2IQ88Uncharacterized protein. (792 aa)    
Predicted Functional Partners:
A0A1Y2IWJ0
RING-type domain-containing protein.
    
 0.890
A0A1Y2IPE6
EGF-like domain-containing protein.
   
 0.588
A0A1Y2I5H9
WSC-domain-containing protein.
    
  0.457
A0A1Y2IYV5
Uncharacterized protein.
  
 
  0.455
A0A1Y2IPU1
Urea carboxylase.
    
 0.448
A0A1Y2IVQ2
GRIP domain-containing protein.
    
  0.439
A0A1Y2IWY0
Uncharacterized protein.
    
 0.438
A0A1Y2IYW1
NTF2-like protein.
    
  0.433
A0A1Y2IFV0
Importin subunit alpha; Belongs to the importin alpha family.
    
  0.431
A0A1Y2IZH6
Uncharacterized protein.
  
     0.428
Your Current Organism:
Trametes coccinea
NCBI taxonomy Id: 1353009
Other names: Pycnoporus coccineus BRFM310, T. coccinea BRFM310, Trametes coccinea BRFM310
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