STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2J1F3RNA-binding domain-containing protein. (431 aa)    
Predicted Functional Partners:
A0A1Y2IDG2
Polyadenylate-binding protein 2.
  
 
 0.863
A0A1Y2IR60
Eukaryotic translation initiation factor 4E class I; Belongs to the eukaryotic initiation factor 4E family.
   
 0.802
A0A1Y2IM64
Cap binding protein 80-PB.
    
 0.785
A0A1Y2J2E9
Small nuclear ribonucleoprotein Sm D3.
    
 0.783
A0A1Y2IGQ0
Nuclear cap-binding protein subunit 2.
    
 0.772
A0A1Y2J0U6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.763
A0A1Y2J6W6
Uncharacterized protein.
   
 0.750
A0A1Y2IDH5
Small nuclear ribonucleo protein SmF.
    
 0.749
A0A1Y2I8U8
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
0.735
A0A1Y2ID05
RNA-binding domain-containing protein.
    
 0.727
Your Current Organism:
Trametes coccinea
NCBI taxonomy Id: 1353009
Other names: Pycnoporus coccineus BRFM310, T. coccinea BRFM310, Trametes coccinea BRFM310
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