STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET02127.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
SET02142.1
MoxR-like ATPase.
       0.688
SET02104.1
Prephenate dehydratase.
       0.648
SET02159.1
Protein of unknown function DUF58.
       0.582
SET02180.1
N-terminal double-transmembrane domain-containing protein.
       0.579
SET02196.1
Hypothetical protein.
       0.579
SET02088.1
Phosphoglycerate mutase (BPG-independent, AlkP superfamily).
       0.472
Your Current Organism:
Methanococcoides vulcani
NCBI taxonomy Id: 1353158
Other names: DSM 26966, JCM 19278, M. vulcani, Methanococcoides sp. SLH33, strain SLH 33, strain SLH33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.