STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB_2Peptide methionine sulfoxide reductase MsrB. (81 aa)    
Predicted Functional Partners:
mrsA
Peptide methionine sulfoxide reductase MsrA.
 
 0.979
msrB_1
Peptide methionine sulfoxide reductase MsrB.
  
     0.687
ALI37183.1
Hypothetical protein.
       0.548
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
     
 0.523
ALI35152.1
Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
  
  
 0.516
ALI35153.1
Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
  
    0.506
guaA_3
GMP synthase (glutamine-hydrolyzing).
  
  
 0.464
ALI34705.1
Heat shock protein GrpE.
   
 
 0.447
rplK
50S ribosomal protein L11.
   
 
 0.445
rplV
50S ribosomal protein L22.
    
 
 0.427
Your Current Organism:
Nitrosocosmicus oleophilus
NCBI taxonomy Id: 1353260
Other names: C. Nitrosocosmicus oleophilus, Candidatus Nitrosocosmicus oleophilus, Thaumarchaeota archaeon MY3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.