STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DT23_00715Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (386 aa)    
Predicted Functional Partners:
DT23_04060
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.962
DT23_11105
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.919
DT23_12400
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.919
DT23_10500
MFS transporter; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.844
DT23_10955
Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.821
DT23_03265
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.771
DT23_18160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.771
glgA
Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.758
DT23_12075
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.756
DT23_07205
succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.687
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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