STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuCZinc transporter; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (255 aa)    
Predicted Functional Partners:
DT23_03335
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.999
DT23_03320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.998
DT23_03325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the Fur family.
  
 0.986
DT23_06005
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.981
DT23_06010
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.981
DT23_06020
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.927
DT23_14270
Hypothetical protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
      0.631
DT23_00945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.575
DT23_06470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.502
DT23_03310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.485
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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