STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DT23_06860Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family. (505 aa)    
Predicted Functional Partners:
DT23_06290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.
 
 
  0.988
DT23_15345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 5'-nucleotidase family.
 
 
 
0.975
DT23_01215
Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.961
DT23_01220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.961
DT23_01200
Molybdopterin binding oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.875
DT23_01195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.874
DT23_01210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.874
guaB
Inosine-5`-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.861
DT23_06295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.857
DT23_01225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.856
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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