STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DT23_12950Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (124 aa)    
Predicted Functional Partners:
DT23_12945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.949
DT23_12955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.839
DT23_16275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.738
DT23_08380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.700
DT23_07465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.593
DT23_12940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.579
DT23_07460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.562
DT23_14020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.468
DT23_07730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.458
DT23_14055
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.434
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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