STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DT23_15730Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (93 aa)    
Predicted Functional Partners:
DT23_15735
Hypothetical protein; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB [...]
  
    0.847
DT23_00990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.728
DT23_00180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.723
DT23_00175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.716
DT23_03345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.713
DT23_01785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.701
DT23_03010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.701
DT23_01950
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.659
DT23_04390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.650
DT23_07530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.622
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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