STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M899_3417TonB-dependent receptor. (299 aa)    
Predicted Functional Partners:
M899_1131
TonB-dependent receptor.
  
 
 0.930
M899_1501
Transport energizing protein, ExbD/TolR family.
 
 
 0.895
M899_1474
TonB-dependent receptor plug domain protein.
   
 
 0.850
M899_0592
Hypothetical protein.
  
  
  0.827
M899_0392
Putative lipoprotein.
 
  
  0.807
M899_2174
TonB-dependent heme/hemoglobin receptor family protein.
  
 
 0.797
M899_3420
Hypothetical protein.
 
     0.796
M899_0396
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
 
 0.793
M899_0510
Peptidase MA family protein.
 
 
 
 0.792
M899_1498
Transporter, MotA/TolQ/ExbB proton channel family protein.
 
 
 0.792
Your Current Organism:
Bacteriovorax sp. BSW11IV
NCBI taxonomy Id: 1353529
Other names: B. sp. BSW11_IV, Bacteriovorax sp. BSW11_IV
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.