STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWQ04388.1Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (57 aa)    
Predicted Functional Partners:
KWQ05629.1
DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.876
KWQ04389.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.739
KWQ04390.1
Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.739
KWQ04073.1
DNA topoisomerase IV subunit B; Decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.512
gyrB
DNA gyrase subunit B; Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.512
KWQ04289.1
DNA topoisomerase IV subunit A; Decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.490
KWQ03589.1
AIPR protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.462
KWQ04387.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
KWQ04391.1
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
Your Current Organism:
Acinetobacter harbinensis
NCBI taxonomy Id: 1353941
Other names: A. harbinensis, Acinetobacter harbinensis Li et al. 2014, Acinetobacter sp. HITLi 7, CGMCC 1.12528, KCTC 32411, strain HITLi 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.