STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A165H5U6S-adenosyl-L-methionine-dependent methyltransferase. (297 aa)    
Predicted Functional Partners:
A0A165D9H5
Release factor.
  
 
 0.982
A0A165FCY0
Trm112.
    
 0.967
A0A165CZS9
Peptide chain release factor eRF/aRF subunit 1.
    
 0.820
A0A165FPJ7
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.818
A0A165ENC3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.778
A0A165JRV5
Coproporphyrinogen oxidase.
   
 
 0.766
A0A165F5S8
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.755
A0A165F6A3
Adenosylhomocysteinase.
   
 
  0.695
A0A165JTT4
Tr-type G domain-containing protein.
    
  0.683
A0A165IWW6
Beta_elim_lyase domain-containing protein.
    
  0.660
Your Current Organism:
Calocera cornea
NCBI taxonomy Id: 1353952
Other names: C. cornea HHB12733, Calocera cornea HHB12733
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.