STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND73669.1Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
AND72188.1
EDD domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.691
AND72384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.652
AND71603.1
Class C sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.551
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.518
AND71695.1
Fatty acid-binding protein DegV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.512
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.487
AND71601.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
AND71602.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
AND71600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
AND71943.1
Cell division protein FtsJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.450
Your Current Organism:
Enterococcus hirae
NCBI taxonomy Id: 1354
Other names: ATCC 8043, ATCC 9790, CCM 2423, CCUG 18659, CCUG 19917, CFBP 4250, CIP 53.48, DSM 20160, E. hirae, HAMBI 644, IFO 3181, JCM 8729, LMG 6399, LMG:6399, NBRC 3181, NCCB 46070, NCCB 58005, NCIMB 6459, NCTC 12367, strain E.E. Snell strain R
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