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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND72669.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (731 aa)    
Predicted Functional Partners:
AND72668.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.895
AND72667.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.877
AND72685.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.709
AND72666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
AND72885.1
Quinolone resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.534
AND73400.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.517
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 
 0.512
AND71557.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.497
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.493
AND72995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.467
Your Current Organism:
Enterococcus hirae
NCBI taxonomy Id: 1354
Other names: ATCC 8043, ATCC 9790, CCM 2423, CCUG 18659, CCUG 19917, CFBP 4250, CIP 53.48, DSM 20160, E. hirae, HAMBI 644, IFO 3181, JCM 8729, LMG 6399, LMG:6399, NBRC 3181, NCCB 46070, NCCB 58005, NCIMB 6459, NCTC 12367, strain E.E. Snell strain R
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