STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AND72833.1Recombinase RecT; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)    
Predicted Functional Partners:
AND72834.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.983
AND72832.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.712
AND72830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
AND72831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.623
AND72829.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
AND72835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
AND72836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
AND72838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
AND72837.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
AND73714.1
Phage head morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.407
Your Current Organism:
Enterococcus hirae
NCBI taxonomy Id: 1354
Other names: ATCC 8043, ATCC 9790, CCM 2423, CCUG 18659, CCUG 19917, CFBP 4250, CIP 53.48, DSM 20160, E. hirae, HAMBI 644, IFO 3181, JCM 8729, LMG 6399, LMG:6399, NBRC 3181, NCCB 46070, NCCB 58005, NCIMB 6459, NCTC 12367, strain E.E. Snell strain R
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.