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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celCPTS cellobiose transporter subunit IIA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)    
Predicted Functional Partners:
celB
PTS cellobiose transporter subunit IIB; Required for cellobiose uptake and metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
celD
PTS cellobiose transporter subunit IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.997
AND72894.1
PTS lactose transporter subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
AND73482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.954
AND73010.1
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
AND73046.1
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
AND71973.1
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.933
AND73466.1
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.933
AND73391.1
PTS sugar transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.930
AND73484.1
Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
Your Current Organism:
Enterococcus hirae
NCBI taxonomy Id: 1354
Other names: ATCC 8043, ATCC 9790, CCM 2423, CCUG 18659, CCUG 19917, CFBP 4250, CIP 53.48, DSM 20160, E. hirae, HAMBI 644, IFO 3181, JCM 8729, LMG 6399, LMG:6399, NBRC 3181, NCCB 46070, NCCB 58005, NCIMB 6459, NCTC 12367, strain E.E. Snell strain R
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