STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYVA_2208Malate:quinone oxidoreductase. (519 aa)    
Predicted Functional Partners:
gltA
Type II citrate synthase.
  
 
 0.987
fumC
Aspartate ammonia-lyase.
    
 0.980
MYVA_2978
Malate synthase.
     
 0.976
mdh
Malate dehydrogenase.
   
 0.964
citA
Citrate synthase.
  
 
 0.942
MYVA_2049
Pyruvate carboxylase.
   
 
 0.925
MYVA_2612
Phosphoenolpyruvate carboxylase.
    
 0.925
pyc
Pyruvate carboxylase.
   
 
 0.925
MYVA_0210
Phosphoenolpyruvate carboxykinase.
   
 
 0.923
MYVA_4258
Malate dehydrogenase.
  
 
 0.916
Your Current Organism:
Mycolicibacterium vaccae
NCBI taxonomy Id: 1354275
Other names: M. vaccae 95051, Mycobacterium vaccae 95051, Mycolicibacterium vaccae 95051
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.