STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB88992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (449 aa)    
Predicted Functional Partners:
EQB88820.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.991
EQB86443.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.991
EQB88821.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.892
EQB86442.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.892
EQB86726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.872
EQB88819.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.871
EQB90099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.854
EQB89728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.851
EQB86445.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.847
rnfB
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.817
Your Current Organism:
Clostridium sp. BL8
NCBI taxonomy Id: 1354301
Other names: C. sp. BL8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.