STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M917_0995C-terminal processing peptidase precursor. (500 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.691
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
 
  0.533
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
     0.462
M917_2600
Membrane alanine aminopeptidase N.
 
  
 0.456
M917_1380
Serine protease precursor MucD/AlgY associated with sigma factor RpoE; Belongs to the peptidase S1C family.
  
  
 0.452
M917_0045
Hypothetical protein.
   
   0.449
M917_1250
Hypothetical protein; Belongs to the peptidase S1B family.
  
  
 0.444
M917_0023
Hypothetical protein.
   
   0.434
M917_0408
Ig domain protein, group 1 domain protein.
   
   0.434
M917_1864
Hypothetical protein.
   
   0.434
Your Current Organism:
Psychrobacter aquaticus
NCBI taxonomy Id: 1354303
Other names: P. aquaticus CMS 56, Psychrobacter aquaticus CMS 56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.