STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744325_01936Unannotated protein. (198 aa)    
Predicted Functional Partners:
GCA_000744325_02341
Unannotated protein.
 
  
  0.854
GCA_000744325_01036
Unannotated protein.
 
  
  0.852
GCA_000744325_01751
Unannotated protein.
 
  
  0.849
GCA_000744325_01938
Unannotated protein.
 
     0.769
GCA_000744325_01937
Unannotated protein.
       0.732
GCA_000744325_00428
Unannotated protein.
    
  0.636
GCA_000744325_04531
Unannotated protein.
  
     0.586
GCA_000744325_03847
Unannotated protein.
  
     0.567
GCA_000744325_03701
Unannotated protein.
  
     0.510
GCA_000744325_04335
Unannotated protein.
 
     0.500
Your Current Organism:
Roseovarius sp. MCTG156
NCBI taxonomy Id: 1354722
Other names: R. sp. MCTG156(2b), Roseovarius sp. MCTG156(2b)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.