STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744325_04993Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000744325_05119
Unannotated protein.
  
     0.765
GCA_000744325_05113
Unannotated protein.
 
     0.750
GCA_000744325_02319
Unannotated protein.
  
     0.704
GCA_000744325_05118
Unannotated protein.
  
     0.650
GCA_000744325_01265
Unannotated protein.
  
     0.617
GCA_000744325_01910
Unannotated protein.
  
     0.615
GCA_000744325_01103
Unannotated protein.
  
     0.589
GCA_000744325_01792
Unannotated protein.
 
     0.568
GCA_000744325_04992
Unannotated protein.
       0.542
GCA_000744325_00391
Unannotated protein.
  
     0.455
Your Current Organism:
Roseovarius sp. MCTG156
NCBI taxonomy Id: 1354722
Other names: R. sp. MCTG156(2b), Roseovarius sp. MCTG156(2b)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.