STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M896_110190Putative methyl transferase. (511 aa)    
Predicted Functional Partners:
M896_110210
WD_REPEATS_REGION domain-containing protein.
    
 0.997
M896_080720
WD_REPEATS_REGION domain-containing protein.
    
 0.964
M896_020850
PHD-type domain-containing protein.
   
 0.931
M896_050930
Uncharacterized protein.
   
 0.913
M896_030880
Uncharacterized protein.
   
 
 0.910
M896_012210
Uncharacterized protein.
   
 0.858
M896_010330
Forkhead/HNF3 transcription factor.
    
 0.826
M896_121210
Putative transcription factor.
    
 0.826
M896_120870
Putative synaptobrevin/VAMP-like protein.
    
 0.820
M896_040020
PCI domain-containing protein.
    
 0.809
Your Current Organism:
Ordospora colligata
NCBI taxonomy Id: 1354746
Other names: O. colligata OC4, Ordospora colligata OC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.