STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M896_040610Uncharacterized protein. (323 aa)    
Predicted Functional Partners:
M896_020060
Thioredoxin domain-containing protein.
    
 0.966
M896_010560
Thioredoxin reductase-like protein.
    
 0.797
M896_010600
Thioredoxin.
    
 0.796
M896_020490
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.629
M896_040110
ER translocation protein Sec61; Belongs to the SecY/SEC61-alpha family.
    
 
 0.514
M896_121800
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
      
 0.499
M896_121340
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 
 0.466
M896_070100
Sulfhydryl oxidase.
    
 
 0.459
M896_060850
Subunit Sec63 of preprotein translocase.
   
  
 0.432
Your Current Organism:
Ordospora colligata
NCBI taxonomy Id: 1354746
Other names: O. colligata OC4, Ordospora colligata OC4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.