STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK78037.1Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
AHK80455.1
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.890
AHK78116.1
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.875
AHK78036.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.815
AHK78696.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.678
AHK78889.1
Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.649
trkA
Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.646
AHK78114.1
Lipopolysaccharide heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.562
AHK78227.1
D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.555
AHK78265.1
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.526
AHK80234.1
Glycosyl transferase family 39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.497
Your Current Organism:
Halorhodospira halochloris
NCBI taxonomy Id: 1354791
Other names: H. halochloris str. A, Halorhodospira halochloris str. A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.