STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK78750.1Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
AHK79260.1
Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
AHK78573.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.989
nuoB
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 0.980
rplU
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.976
AHK78574.1
NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.971
AHK78420.1
Deoxyadenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.970
AHK78748.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.969
AHK80607.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.968
AHK79760.1
acyl--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.966
AHK78571.1
NADH-quinone oxidoreductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.961
Your Current Organism:
Halorhodospira halochloris
NCBI taxonomy Id: 1354791
Other names: H. halochloris str. A, Halorhodospira halochloris str. A
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