STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK80265.1Baf family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
AHK80266.1
biotin--acetyl-CoA-carboxylase ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.975
AHK78418.1
Pantoate--beta-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.957
AHK77948.1
Phosphopantothenoylcysteine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.903
AHK78289.1
Phosphopantetheine adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.897
mazG
Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.854
AHK78417.1
Aspartate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.756
AHK80267.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.625
AHK79161.1
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.585
AHK80264.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
AHK80618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.491
Your Current Organism:
Halorhodospira halochloris
NCBI taxonomy Id: 1354791
Other names: H. halochloris str. A, Halorhodospira halochloris str. A
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