STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH79173.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
KRH78185.1
Peptidase propeptide and YPEB domain protein.
  
    0.928
KRH79175.1
Hypothetical protein.
 
     0.844
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
    0.835
iorA
Isoquinoline 1-oxidoreductase subunit alpha.
       0.768
KRH78863.1
Hypothetical protein.
  
     0.649
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.611
nudG
CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
  
     0.568
cbiB
Cobalamin biosynthesis protein CbiB.
  
     0.553
KRH79454.1
Gram-negative bacterial tonB protein.
  
     0.551
KRH79496.1
Sulfur carrier protein ThiS.
  
     0.537
Your Current Organism:
Ferrovum sp. JA12
NCBI taxonomy Id: 1356299
Other names: F. sp. JA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.