STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRH79549.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
KRH79547.1
Hypothetical protein.
       0.773
KRH79548.1
Hypothetical protein.
       0.773
KRH79546.1
Hypothetical protein.
       0.718
KRH79545.1
Hypothetical protein.
       0.693
KRH79550.1
Hypothetical protein.
       0.682
KRH79551.1
Hypothetical protein.
       0.682
KRH79552.1
Hypothetical protein.
       0.642
KRH79553.1
Hypothetical protein.
       0.475
KRH79554.1
Hypothetical protein.
       0.475
KRH79555.1
Hypothetical protein.
       0.461
Your Current Organism:
Ferrovum sp. JA12
NCBI taxonomy Id: 1356299
Other names: F. sp. JA12
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