STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbpAHeme-binding protein A precursor. (594 aa)    
Predicted Functional Partners:
gsiC
Glutathione transport system permease protein GsiC.
 
 0.996
oppC
Oligopeptide transport system permease protein OppC.
 
 0.993
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 
  0.978
fabI
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI.
 
     0.658
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
     
 0.627
glnQ
Glutamine transport ATP-binding protein GlnQ.
   
 
 0.579
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
    
  0.462
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
    
 0.454
ybhF
Putative ABC transporter ATP-binding protein YbhF.
    
 0.454
pstS
Phosphate-binding protein PstS precursor; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
 0.449
Your Current Organism:
Ferrovum sp. JA12
NCBI taxonomy Id: 1356299
Other names: F. sp. JA12
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.