STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhhWQuercetin 2,3-dioxygenase; Belongs to the pirin family. (234 aa)    
Predicted Functional Partners:
sfsA_1
Sugar fermentation stimulation protein A; Belongs to the SfsA family.
       0.768
sfsA_2
Sugar fermentation stimulation protein A.
       0.611
KRH78710.1
LigB family dioxygenase.
 
  
 0.532
tusA
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
  
    0.520
qorA
Quinone oxidoreductase 1.
       0.517
KRH78333.1
Pirin; Belongs to the pirin family.
 
    0.514
KRH78618.1
Hypothetical protein.
       0.504
cysG
Siroheme synthase; Belongs to the precorrin methyltransferase family.
       0.504
KRH78620.1
Hypothetical protein.
       0.430
yijE_2
Putative inner membrane transporter yiJE.
       0.423
Your Current Organism:
Ferrovum sp. JA12
NCBI taxonomy Id: 1356299
Other names: F. sp. JA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.