STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pipProline iminopeptidase; Belongs to the peptidase S33 family. (316 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.925
KRH78744.1
acyl-CoA dehydrogenase, short-chain specific.
   
 0.844
scoA
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.814
pheA
Prephenate dehydratase.
     
 0.760
pta
Phosphate acetyltransferase.
  
 
 0.739
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.721
lpdA
Dihydrolipoyl dehydrogenase.
   
 
 0.697
tcyN
L-cystine import ATP-binding protein TcyN; Belongs to the binding-protein-dependent transport system permease family.
    
  0.674
KRH78537.1
succinyl-CoA synthetase subunit alpha.
   
 
  0.669
acpA
Acyl carrier protein.
    
 0.639
Your Current Organism:
Ferrovum sp. JA12
NCBI taxonomy Id: 1356299
Other names: F. sp. JA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.