STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEBREN_28573Cyclic nucleotide-binding domain-containing protein. (800 aa)    
Predicted Functional Partners:
Cbn-mec-14
CBN-MEC-14 protein.
    
 0.816
Cbn-unc-2
CBN-UNC-2 protein.
    
 0.788
CAEBREN_28992
Uncharacterized protein.
    
 0.661
CAEBREN_29219
EF-hand domain-containing protein.
    
 0.661
Cbn-daf-21
CBN-DAF-21 protein.
    
 
 0.646
Cbn-lpl-1
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.635
CAEBREN_09476
Uncharacterized protein.
     
 0.626
CAEBREN_31617
Uncharacterized protein.
     
 0.604
CAEBREN_29282
Uncharacterized protein.
     
 0.604
Cbn-tag-19
CBN-TAG-19 protein.
     
 0.597
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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