STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbn-cux-7CBN-CUX-7 protein. (1363 aa)    
Predicted Functional Partners:
Cbn-atl-1
CBN-ATL-1 protein; Belongs to the PI3/PI4-kinase family.
    
 0.982
CAEBREN_15689
Uncharacterized protein.
    
 0.981
CAEBREN_31817
Uncharacterized protein.
    
 0.981
Cbn-ruvb-2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.955
CAEBREN_01260
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.948
CAEBREN_24914
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.875
CAEBREN_03943
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.823
CAEBREN_29363
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.823
CAEBREN_31932
Uncharacterized protein.
    
 0.823
CAEBREN_20602
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.823
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri Sudhaus & Kiontke, 2007, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.